Rat structural genomics portal

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Heterogeneous stock rats: genomics resources

Below are recent dataset that define accessible part of rat genomes and base and structural varaition between HS parental strains

Genome accessibility files

BED files represent regions that can be robustly scored by NGS sequencing

ACI/N  BN/SsN  BUF/N  F344/N  M520/N  MR/N  WKY/N  WN/N  LE/Stm

Variant calls

Base (SNPs) and strucutral changes( indels, SVs) scored for HS parents

SNPs  Indels  SVs  Heterozygous calls